PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891674.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family AP2
Protein Properties Length: 354aa    MW: 39973.2 Da    PI: 7.5686
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.27.2e-1245101155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  ++n  ++k+ + g ++ ++ Aa a++ a++k++g
  XP_015891674.1  45 SVYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEQAAAHAYDLAALKYWG 101
                     78*******************99998898888888*****99*************98 PP

2AP251.33e-16144195155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  XP_015891674.1 144 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 195
                     89****99**********99966...3.6*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.7E-1445110IPR016177DNA-binding domain
PfamPF008475.6E-845101IPR001471AP2/ERF domain
PROSITE profilePS5103218.49246109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-1246110IPR001471AP2/ERF domain
SMARTSM003801.1E-1746115IPR001471AP2/ERF domain
PRINTSPR003674.0E-64758IPR001471AP2/ERF domain
CDDcd000186.18E-24144205No hitNo description
SuperFamilySSF541711.05E-17144205IPR016177DNA-binding domain
PfamPF008475.5E-12144195IPR001471AP2/ERF domain
PROSITE profilePS5103218.334145203IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-17145204IPR001471AP2/ERF domain
SMARTSM003801.2E-24145209IPR001471AP2/ERF domain
PRINTSPR003674.0E-6185205IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MAKLSQQNRK SNNANNNTNT TANTAIKVKR TRRSVPRDSP PQRSSVYRGV TRHRWTGRYE  60
AHLWDKNCWN ESQNKKGRQG AYDDEQAAAH AYDLAALKYW GQDTILNFPL ATYEKELKEM  120
EGVAREEYIG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQE  180
EAATAYDMAA IEYRGLNAVT NFDLSRYIKW LKPNGQDNEN SSFPSFINTT TTTSTDQPNL  240
TQNLNQELGL GFFQNQQQTS GSGETILAQP RPATATSALG LLLQSTKFKE MMEMTSAVDS  300
PVSPPESDPP QCTFPDDIQT YFDCQDSSSY GDHGDDIIFG ELNSLMPPMF QCDF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891674.10.0PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060
SwissprotQ94AN41e-118AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLM5XNZ80.0M5XNZ8_PRUPE; Uncharacterized protein
STRINGVIT_11s0037g00870.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130034101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.11e-102ARIA-interacting double AP2 domain protein